Package: zenplots 1.0.6

Wayne Oldford

zenplots: Zigzag Expanded Navigation Plots

Graphical tools for visualizing high-dimensional data along a path of alternating one- and two-dimensional plots. Note that this includes interactive graphics plots based on 'loon' in turn based on 'tcltk' (included as part of the standard R distribution). It also requires 'graph' from Bioconductor. For more detail on use and algorithms, see <doi:10.18637/jss.v095.i04>.

Authors:Marius Hofert [aut], Wayne Oldford [aut, cre]

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zenplots.pdf |zenplots.html✨
zenplots/json (API)
NEWS

# Install 'zenplots' in R:
install.packages('zenplots', repos = c('https://great-northern-diver.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/great-northern-diver/zenplots/issues

Datasets:
  • de_elect - German Election Data from 2002 and 2005
  • happiness - World Happiness Data Set
  • olive - Olive Oil Data Set
  • wine - Wine Data Set

On CRAN:

dimensional-datadimensional-plotsgraphical-systemspairszigzag

78 exports 3 stars 1.47 score 9 dependencies 1 dependents 12 scripts 361 downloads

Last updated 11 months agofrom:13d804186f. Checks:OK: 7 NOTE: 2. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 22 2024
R-4.5-win-x86_64NOTEAug 22 2024
R-4.5-linux-x86_64NOTEAug 22 2024
R-4.4-win-x86_64OKAug 22 2024
R-4.4-mac-x86_64OKAug 22 2024
R-4.4-mac-aarch64OKAug 22 2024
R-4.3-win-x86_64OKAug 22 2024
R-4.3-mac-x86_64OKAug 22 2024
R-4.3-mac-aarch64OKAug 22 2024

Exports:arrow_1d_graphicsarrow_1d_gridarrow_1d_loonarrow_2d_graphicsarrow_2d_gridarrow_2d_loonas_numericaxes_2d_graphicsaxes_2d_gridaxes_2d_loonboxplot_1d_graphicsboxplot_1d_gridboxplot_1d_loonburstburst_auxcheck_zargsconnect_pairsconvert_occupancydensity_1d_graphicsdensity_1d_griddensity_1d_loondensity_2d_graphicsdensity_2d_griddensity_2d_loonextract_1dextract_2dextract_pairsgraph_pairsgroup_2d_graphicsgroup_2d_gridgroup_2d_loongroupDatahist_1d_graphicshist_1d_gridhist_1d_loonindexDatais.standardjitter_1d_graphicsjitter_1d_gridjitter_1d_loonl_ispace_configlabel_1d_graphicslabel_1d_gridlabel_1d_loonlabel_2d_graphicslabel_2d_gridlabel_2d_loonlines_1d_graphicslines_1d_gridlines_1d_loonn2dcols_auxna_omit_loonnum_colsplot_existsplot_indicesplot_regionpoints_1d_graphicspoints_1d_gridpoints_1d_loonpoints_2d_graphicspoints_2d_gridpoints_2d_loonqq_2d_graphicsqq_2d_gridrect_1d_graphicsrect_1d_gridrect_1d_loonrect_2d_graphicsrect_2d_gridrect_2d_loonrug_1d_graphicsrug_1d_gridturn_checkerunfoldvportzenarrowzenpathzenplot

Dependencies:BiocGenericscodetoolsforeachgraphgtoolsiteratorsMASSPairVizTSP

Introduction to zenplots

M. Hofert and R. W. Oldford

Rendered fromintro.Rmdusingknitr::rmarkdownon Aug 22 2024.

Last update: 2019-07-30
Started: 2019-07-30

Zigzag expanded navigation plots in R: The R package zenplots

M. Hofert and R. W. Oldford

Rendered fromselected_features.Rmdusingknitr::rmarkdownon Aug 22 2024.

Last update: 2021-09-05
Started: 2019-07-23

Readme and manuals

Help Manual

Help pageTopics
Auxiliary function for adjusting a bounding boxadjust_bb
Arrow plot in 1d using R's base graphicsarrow_1d_graphics
Arrow plot in 1d using the grid packagearrow_1d_grid
Arrow plot in 1d using the interactive loon packagearrow_1d_loon
Arrow plot in 2d using R's base graphicsarrow_2d_graphics
Arrow plot in 2d using the grid packagearrow_2d_grid
Arrow plot in 2d using the interactive loon packagearrow_2d_loon
A list of columnsas_numeric
Axes arrows in 2d using R's base graphicsaxes_2d_graphics
Axes arrow using the grid packageaxes_2d_grid
Axes arrows in 2d using the interactive loon packageaxes_2d_loon
Box plot in 1d using R's base graphicsboxplot_1d_graphics
Boxplot in 1d using the grid packageboxplot_1d_grid
Boxplot in 1d using the interactive loon packageboxplot_1d_loon
Splitting an Input Object into a List of Columnsburst
Auxiliary function for burst()burst_aux
Checking whether certain arguments appear in zargscheck_zargs
Connecting Possibly Overlapping Pairs Into a List of Pathsconnect_pairs
Converting an Occupancy Matrixconvert_occupancy
German Election Data from 2002 and 2005de_elect
Density plot in 1d using R's base graphicsdensity_1d_graphics
Density plot in 1d using the grid packagedensity_1d_grid
Density plot in 1d using the interactive loon packagedensity_1d_loon
Density plot in 2d using R's base graphicsdensity_2d_graphics
Density plot in 2d using the grid packagedensity_2d_grid
Density plot in 2d using the interactive loon packagedensity_2d_loon
Extracting information for our default/provided plot1d()extract_1d
Extracting information for our default/provided plot2d()extract_2d
Extract Pairs from a Path of Indicesextract_pairs
Compute the layout of the zen plotget_layout
Computing the path according to the provided methodget_path
Compute turns for zigzagget_zigzag_turns
Turn pairs or paths into a graphgraph_pairs
Plot of labels indicating adjacent groups using R's base graphicsgroup_2d_graphics
Plot of labels indicating adjacent groups using the grid packagegroup_2d_grid
Plot of labels indicating adjacent groups using the interactive loon packagegroup_2d_loon
Splitting a Matrix into a List of MatricesgroupData
World Happiness Data Sethappiness
Histogram as 1d plot using R's base graphicshist_1d_graphics
Histogram in 1d using the grid packagehist_1d_grid
Histogram in 1d using the interactive loon packagehist_1d_loon
Indexing a Matrix or Data Frame According to Given IndicesindexData
Check Argument for Being a Vector, Matrix, Data Frame or a List of suchis.standard
Jittered dot plot in 1d using R's base graphicsjitter_1d_graphics
Jittered dot plot in 1d using the grid packagejitter_1d_grid
Jittered dot plot in 1d using the interactive loon packagejitter_1d_loon
Configuring a loon plot to accommodate ispacel_ispace_config
Label plot in 1d using R's base graphicslabel_1d_graphics
Label plot in 1d using the grid packagelabel_1d_grid
Label plot in 1d using the interactive loon packagelabel_1d_loon
Label plot in 2d using R's base graphicslabel_2d_graphics
Label plot in 2d using the grid packagelabel_2d_grid
Label plot in 2d using the interactive loon packagelabel_2d_loon
Layout plot in 1dlayout_1d_graphics
Layout plot in 1d using the grid packagelayout_1d_grid
Layout plot in 1d using the interactive loon packagelayout_1d_loon
Layout plot in 2dlayout_2d_graphics
Layout plot in 2d using the grid packagelayout_2d_grid
Layout plot in 2d using the interactive loon packagelayout_2d_loon
Line plot in 1d using R's base graphicslines_1d_graphics
Lines plot in 1d using the grid packagelines_1d_grid
Lines plot in 1d using the interactive loon packagelines_1d_loon
Determine the new position when moving from the current position in a given directionmove
Auxiliary Function for Constructing Default n2dcolsn2dcols_aux
Helper function to remove NAs for loon plotsna_omit_loon
Determine the next position to move to and the turn out of therenext_move_tidy
Determine the number of columns if is.standard(x)num_cols
Olive Oil Data Setolive
Check whether functions (plot*d to zenplot()) existplot_exists
Plot Indices of the Current Plotplot_indices
Function to set up the plot region for graphics plotsplot_region
Dot plot in 1d using R's base graphicspoints_1d_graphics
Dot plot in 1d using the grid packagepoints_1d_grid
Dot plot in 1d using the interactive loon packagepoints_1d_loon
Point plot in 2d using R's base graphicspoints_2d_graphics
Point plot in 2d using the grid packagepoints_2d_grid
Point plot in 2d using the interactive loon packagepoints_2d_loon
Quantile-quantile plot in 2d using R's base graphicsqq_2d_graphics
Quantile-quantile plot in 2d using the grid packageqq_2d_grid
Rectangle plot in 1d using R's base graphicsrect_1d_graphics
Rectangle plot in 1d using the grid packagerect_1d_grid
Rectangle plot in 1d using the interactive loon packagerect_1d_loon
Rectangle plot in 2d using R's base graphicsrect_2d_graphics
Rectangle plot in 2d using the grid packagerect_2d_grid
Rectangle plot in 2d using the interactive loon packagerect_2d_loon
Rug plot in 1d using R's base graphicsrug_1d_graphics
Rug plot in 1d using the grid packagerug_1d_grid
Rug plot in 1d using the interactive loon packagerug_1d_loon
Check the Turns (Number/Type)turn_checker
Unfold the hypercube and produce all information concerning the zenpath and zenplot layoutunfold
Viewport Constructing Function for Grid Functionsvport
Wine Data Setwine
Defining an arrowzenarrow
Construct a Path of Indices to Order Variableszenpath
Main function to create a zenplotzenplot
zenplots: Zigzag Expanded Navigation Plotszenplots-package zenplots